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Import a .mat annotation file into the SQLite database

Source: R/database.R
import_mat_to_db.Rd

Reads an existing .mat annotation file and writes its data into the SQLite database. The class list (class2use_manual) and classlist indices are read directly from the .mat file to ensure a faithful import. ROIs with NaN indices (not yet reviewed) are stored with is_manual = 0.

Usage

import_mat_to_db(mat_path, db_path, sample_name, annotator = "imported")

Arguments

mat_path

Path to the .mat annotation file

db_path

Path to the SQLite database file

sample_name

Sample name

annotator

Annotator name (defaults to "imported")

Value

TRUE on success, FALSE on failure

Examples

if (FALSE) { # \dontrun{
import_mat_to_db(
  mat_path = "/data/manual/D20230101T120000_IFCB134.mat",
  db_path = get_db_path("/data/manual"),
  sample_name = "D20230101T120000_IFCB134"
)
} # }